The detailed information of tRNA gene sequence


Sequence ID>ENV09001934
Genome IDACSG01000049
Search identical group
Phylum/ClassUncultured SUP05 cluster bacterium Contig34382
Species
Start position on genome 12579
End posion on genome 12488
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttttctttt
tRNA gene sequence 
GGAGAGTTGGCCGAGTGGCTGAAGGCGCGCCCCTGCTAAGGGTGTATAGGGTTTATCCCC
TATCGAGGGTTCAAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
tacatttact
Secondary structure (Cloverleaf model)
>ENV09001934	Ser	GCT
                   t      GCCA tacatttact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGTTTATCCCCTATC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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