The detailed information of tRNA gene sequence


Sequence ID>ENV09002262
Genome IDACXJ01012402
Search identical group
Phylum/ClassMine drainage metagenome Contig1
Species
Start position on genome 245
End posion on genome 317
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
accgagatag
tRNA gene sequence 
GGGCTTGTGGTCTAGCGGTTATGACATCGCTCTCACACAGCGAAGGCCGCCGGTTCAAAT
CCGGCCAAGCCCAttt
Downstream region at tRNA end position 
aaaaatgtaa
Secondary structure (Cloverleaf model)
>ENV09002262	Val	CAC
                   g      Attt aaaaatgtaa
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     C G G C C     A
      C G A        G      | | | | |     A
    G       T C T G       G C C G G     C
    G         | | |                 T T
    T       T G A C
      T A          A     AGGCC
                    T - A
                    C - G
                    G - C
                    C - G
                    T - A
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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