The detailed information of tRNA gene sequence


Sequence ID>ENV09002276
Genome IDACXK01000041
Search identical group
Phylum/ClassThermoplasmatales archaeon A-plasma AplasmaContig10144
Species
Start position on genome 6771
End posion on genome 6844
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataactggga
tRNA gene sequence 
GGGGCTGTAGCTTAGCTCGGTAGAGCGCCTGGCTCATAACCAGGTGGTCATCGGTTCAAA
CCCGGTCAGCCCCAttt
Downstream region at tRNA end position 
tcttttaggt
Secondary structure (Cloverleaf model)
>ENV09002276	Met	CAT
                   a      Attt tcttttaggt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          C A
                    T     T G G C C     A
      C G A        A      | + | | |     A
    T       T T C G       A T C G G     C
    C       + | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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