The detailed information of tRNA gene sequence


Sequence ID>ENV09002279
Genome IDACXK01000045
Search identical group
Phylum/ClassThermoplasmatales archaeon A-plasma AplasmaContig10144
Species
Start position on genome 13204
End posion on genome 13277
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cccagacaga
tRNA gene sequence 
GGGCTTGTGGTCTAGCGGTTATGACATCGCTCTCACACAGCGAAGGCCGCCGGTTCAAAT
CCGGCCAAGCCCACtt
Downstream region at tRNA end position 
tccgttgttt
Secondary structure (Cloverleaf model)
>ENV09002279	Val	CAC
                   a      ACtt tccgttgttt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     C G G C C     A
      C G A        G      | | | | |     A
    G       T C T G       G C C G G     C
    G         | | |                 T T
    T       T G A C
      T A          A     AGGCC
                    T - A
                    C - G
                    G - C
                    C - G
                    T - A
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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