The detailed information of tRNA gene sequence


Sequence ID>ENV09002285
Genome IDACXK01000057
Search identical group
Phylum/ClassThermoplasmatales archaeon A-plasma AplasmaContig10144
Species
Start position on genome 13331
End posion on genome 13259
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
acagacatcc
tRNA gene sequence 
GGGCCGGTAGATCAGAGGTAGATCGCTTCCTTGGCATGGAAGAGGCCAGGGGTTCAAATC
CCCTCCGGTCCACat
Downstream region at tRNA end position 
ttacagaaat
Secondary structure (Cloverleaf model)
>ENV09002285	Ala	GGC
                   c      ACat ttacagaaat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T C C C C     A
        G A        A      | | | | |     A
      A     C T A G       A G G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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