The detailed information of tRNA gene sequence


Sequence ID>ENV09002288
Genome IDACXK01000064
Search identical group
Phylum/ClassThermoplasmatales archaeon A-plasma AplasmaContig10144
Species
Start position on genome 56601
End posion on genome 56676
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacctgtgga
tRNA gene sequence 
AGCGGGGTAGGGTAGTTAGGAGATCCCCGACGGGCTCATAACCCGTAGATCAATGGTTCA
AATCCATTCCCCGCTAttt
Downstream region at tRNA end position 
ttcaaggtat
Secondary structure (Cloverleaf model)
>ENV09002288	Met	CAT
                   a      Attt ttcaaggtat
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T A C C     A
    T T G A        A      | | | | |     A
  A         T G G G       A A T G G     C
  G           | | |                 T T
  G         C C C C
    A G A T        G     AGATC
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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