The detailed information of tRNA gene sequence


Sequence ID>ENV09002300
Genome IDACXK01000076
Search identical group
Phylum/ClassThermoplasmatales archaeon A-plasma AplasmaContig10144
Species
Start position on genome 8250
End posion on genome 8179
Amino Acid Pseudo
Anticodon GCA
Upstream region at tRNA start position 
aagggaaact
tRNA gene sequence 
GGATAGGTGGCAGAGCGGTCATGCGTGGGACTGCAGATCCCATCTAATAGGGTTCAACTC
CCTACCTATCCTttt
Downstream region at tRNA end position 
aattaaataa
Secondary structure (Cloverleaf model)
>ENV09002300	Pseudo	GCA
                   t      Tttt aattaaataa
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     G - C          T C
                    T     A T C C C     A
        G A        G      | | | | |     A
      C     G A C G       T A G G G     C
      G       | | |                 T T
      G     A T G C
        T C        G     TCTAA
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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