The detailed information of tRNA gene sequence


Sequence ID>ENV09002301
Genome IDACXK01000083
Search identical group
Phylum/ClassThermoplasmatales archaeon A-plasma AplasmaContig10144
Species
Start position on genome 564
End posion on genome 648
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gggtaagcaa
tRNA gene sequence 
GCTGGGATAGCCTAGCCTGGTAGGGCGCAGGTCTGGAAAACCTGTTCTCTTTGTAGATCG
GGAGTTCAAATCTCCCTCCCAGCGCtt
Downstream region at tRNA end position 
gacacgagat
Secondary structure (Cloverleaf model)
>ENV09002301	Ser	GGA
                   a      GCtt gacacgagat
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C T C     A
      C G A        A      | | | | |     A
    C       T C C G       G G G A G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TTCTCTTTGTAGATC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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