The detailed information of tRNA gene sequence


Sequence ID>ENV09002319
Genome IDACXL01000013
Search identical group
Phylum/ClassThermoplasmatales archaeon E-plasma EplasmaContig2057
Species
Start position on genome 146483
End posion on genome 146400
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cccaagttaa
tRNA gene sequence 
GCTGGGATAGCCTAGCCTGGTAAGGCGCAGGTCTGGAAAGCCTGTGCTCTCGTAGCTCGG
GAGTTCGAATCTCCCTCCCAGCGCtt
Downstream region at tRNA end position 
tttcatggtt
Secondary structure (Cloverleaf model)
>ENV09002319	Ser	GGA
                   a      GCtt tttcatggtt
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C T C     A
      C G A        A      | | | | |     G
    C       T C C G       G G G A G     C
    T       | | | |                 T T
    G       A G G C
      G T A        G     TGCTCTCGTAGCTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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