The detailed information of tRNA gene sequence


Sequence ID>ENV09002322
Genome IDACXL01000013
Search identical group
Phylum/ClassThermoplasmatales archaeon E-plasma EplasmaContig2057
Species
Start position on genome 2554
End posion on genome 2481
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caacggcgta
tRNA gene sequence 
GGGGCTGTAGCTTAGCTAGGTAGAGCGCCTGGCTCATAACCAGGTGGTCATTGGTTCAAA
TCCGATCAGCCCCAttt
Downstream region at tRNA end position 
ttaatcatag
Secondary structure (Cloverleaf model)
>ENV09002322	Met	CAT
                   a      Attt ttaatcatag
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T A G C C     A
      C G A        A      | | + | |     A
    T       T T C G       A T T G G     C
    A       + | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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