The detailed information of tRNA gene sequence


Sequence ID>ENV09002578
Genome IDADGC01006495
Search identical group
Phylum/ClassWallaby gut metagenome MeugComb_C1
Species
Start position on genome 3173
End posion on genome 3080
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggcaataac
tRNA gene sequence 
GGTGAGATGACCGAGAGGCTGAAGGTACTCCCCTGCTAAGGGAGCATACGACCATAAAGT
TGTATCGAGGGTTCGAATCCCTCTCTCACCGCCA
Downstream region at tRNA end position 
ttgtatgcat
Secondary structure (Cloverleaf model)
>ENV09002578	Ser	GCT
                   c      GCCA ttgtatgcat
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      T G A        A     CATACGACCATAAAGTTGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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