The detailed information of tRNA gene sequence


Sequence ID>W2110030294
Genome IDBMLK01000028
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesNovosphingobium indicum CGMCC 1.6784 [BMLK]
Start position on genome 37860
End posion on genome 37950
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccagcgatgc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACGGTAACTCCGT
ATCGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
gccacgcttt
Secondary structure (Cloverleaf model)
>W2110030294	Ser	GGA
                   c      GCCA gccacgcttt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGGTAACTCCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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