The detailed information of tRNA gene sequence


Sequence ID>ENV09002888
Genome IDADGC01041103
Search identical group
Phylum/ClassWallaby gut metagenome MeugComb_C1
Species
Start position on genome 600
End posion on genome 527
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
cggataatat
tRNA gene sequence 
CGCGGTGTGGAGAAGTGGCTATCTCGACAGGCTCATTACCTGTAGAACCTCCGTTCGAGT
CGGAGCACCGCAACat
Downstream region at tRNA end position 
taagtccatc
Secondary structure (Cloverleaf model)
>ENV09002888	Pseudo	CAT
                   t      ACat taagtccatc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     G A G G C     A
      T G A        G      | | | | |     G
    G       A G A G       C T C C G     C
    G       | | | |                 T T
    C       T C T C
      T A          G     AGAAC
                    A - T
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       T
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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