The detailed information of tRNA gene sequence


Sequence ID>ENV09002998
Genome IDADGO01000825
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 230
End posion on genome 143
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccgcgaccc
tRNA gene sequence 
GGAGGAGTGCAGGAGTGGTTGAACTGGCACGCCTGGAAAGTGTGTATACGGGAAACCGTA
TCAAGGGTTCGAATCCCTTCTCCTCCGCtt
Downstream region at tRNA end position 
tggttttctg
Secondary structure (Cloverleaf model)
>ENV09002998	Ser	GGA
                   c      GCtt tggttttctg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G G A C       A A G G G     C
    G         | | |                 T T
    T       A C T G
      T G A        G     TATACGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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