The detailed information of tRNA gene sequence


Sequence ID>ENV09003129
Genome IDADGO01006155
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 528
End posion on genome 435
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatccgttcc
tRNA gene sequence 
GAGAGCGGATGTGGCCGGGTGGCCGCCCTGGTCTTCAAAACCTGTGGGCGCGGTGACGAG
CCGCGCCGGTGGGTTCGACTCCCACGCGCTCTCGttt
Downstream region at tRNA end position 
tttatggaac
Secondary structure (Cloverleaf model)
>ENV09003129	SeC	TCA
                   c      Gttt tttatggaac
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G   G          T C
                    A     C A C C C     A
      G C C        T      | | | | |     G
    G       G G T G       G T G G G     C
    G       | | + |                 T T
    T       C C G C
      G G          C     TGGGCGCGGTGACGAGCCGCGCCG
                    C - G
                    T   T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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