The detailed information of tRNA gene sequence


Sequence ID>ENV09003204
Genome IDADGO01010184
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 324
End posion on genome 400
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgtccacccg
tRNA gene sequence 
GGGCCCGTAGCTCAATCGGTCAGAGCAGCGGACTCATAATCCGTTGGTTGCAGGTTCAAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
ccgtccgcgc
Secondary structure (Cloverleaf model)
>ENV09003204	Met	CAT
                   g      ACCA ccgtccgcgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | | | |     A
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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