The detailed information of tRNA gene sequence


Sequence ID>ENV09003214
Genome IDADGO01011688
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 154
End posion on genome 229
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgaacccctg
tRNA gene sequence 
AGGGGTGTAGCTCTAATTGGTTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGTTCGA
GTCCCTCCACCCCTGCtg
Downstream region at tRNA end position 
gagagtgttt
Secondary structure (Cloverleaf model)
>ENV09003214	Trp	CCA
                   g      GCtg gagagtgttt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
    T A A T        A      | + | | |     G
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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