The detailed information of tRNA gene sequence


Sequence ID>ENV09003215
Genome IDADGO01011775
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 321
End posion on genome 246
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cctcacatct
tRNA gene sequence 
AGGGGTGTGGCGCAATTGGCAGCGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGT
CCTGTCACCCCTGCGA
Downstream region at tRNA end position 
gacgcccatg
Secondary structure (Cloverleaf model)
>ENV09003215	Trp	CCA
                   t      GCGA gacgcccatg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       C G C G       G C A G G     C
    G       | | | |                 T T
    G       G C G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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