The detailed information of tRNA gene sequence


Sequence ID>ENV09003230
Genome IDADGO01012662
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 28
End posion on genome 112
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaagcccttt
tRNA gene sequence 
GGAGGGTTAAGCGAATTGGTGAGCGGCCTGACTCGAAATCAGGTGCCGGGAAACCGGTTG
TGGGTTCGAATCCCATGCCCTCCGCtt
Downstream region at tRNA end position 
cagtaagctt
Secondary structure (Cloverleaf model)
>ENV09003230	Ser	CGA
                   t      GCtt cagtaagctt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G          T A
                    T     T A C C C     A
      T A A        A      + | | | |     G
    T       G C G A       G T G G G     C
    G         | |                   T T
    G       A G C G
      T G          G     TGCCGGGAAACCGGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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