The detailed information of tRNA gene sequence


Sequence ID>ENV09003234
Genome IDADGO01012733
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 96
End posion on genome 21
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagagcccga
tRNA gene sequence 
AGGGTCGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCGGGTTCGATT
CCTGCCGGCCCTGCCC
Downstream region at tRNA end position 
ggtaatgatg
Secondary structure (Cloverleaf model)
>ENV09003234	Trp	CCA
                   a      GCCC ggtaatgatg
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T T
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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