The detailed information of tRNA gene sequence


Sequence ID>ENV09003239
Genome IDADGO01012825
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 459
End posion on genome 370
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctcaccgcac
tRNA gene sequence 
GGGGAGGTCGCATAGTGGCCTAGTGCGGCGGTTTGCTAAACCGCTACAGGGGTAACCCTG
TCGAGGGTTCGAATCCCTCCCTCCCCGCCA
Downstream region at tRNA end position 
cgtttttttg
Secondary structure (Cloverleaf model)
>ENV09003239	Ser	GCT
                   c      GCCA cgtttttttg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TACAGGGGTAACCCTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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