The detailed information of tRNA gene sequence


Sequence ID>ENV09003242
Genome IDADGO01012945
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 251
End posion on genome 340
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gactaccgat
tRNA gene sequence 
GGAGGCTTCGCCTAGTCTGGTCTATGGCGCCGCACTGCTAATGCGGTTTGGGCTATCGCC
CATCCGGGGTTCAAATCCCCGAGCCTCCGCgt
Downstream region at tRNA end position 
ggcggaccgg
Secondary structure (Cloverleaf model)
>ENV09003242	Ser	GCT
                   t      GCgt ggcggaccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A          T A
                    T     G C C C C     A
    C T G A        C      | | | | |     A
  T         T C C G       C G G G G     C
  G           | | |                 T T
  G         T G G C
    T C T A        G     TTTGGGCTATCGCCCATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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