The detailed information of tRNA gene sequence


Sequence ID>ENV09003292
Genome IDADGO01016644
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 90
End posion on genome 166
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caccaaagtc
tRNA gene sequence 
GGAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
cttctccatt
Secondary structure (Cloverleaf model)
>ENV09003292	Asp	GTC
                   c      GCCA cttctccatt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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