The detailed information of tRNA gene sequence


Sequence ID>ENV09003298
Genome IDADGO01017724
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 61
End posion on genome 153
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttgtgctgac
tRNA gene sequence 
GGTGAGGTGCCTGAGAGGCCGAAAGGAGCGGTTTGCTAAACCGTCGTACGCCCTAAAAGC
GTACCGCGGGTTCGAATCCCGCCCTCACCGCGA
Downstream region at tRNA end position 
atcgcattga
Secondary structure (Cloverleaf model)
>ENV09003298	Ser	GCT
                   c      GCGA atcgcattga
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G T C C       G C G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        A     CGTACGCCCTAAAAGCGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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