The detailed information of tRNA gene sequence


Sequence ID>ENV09003331
Genome IDADGO01020798
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 1661
End posion on genome 1587
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tccgataggc
tRNA gene sequence 
GGGCGGTTAGTTCAGCGGTAGAGCACACCCTTCACATGGGTGGGGCCACAGGTTCAAATC
CTGTACCGCCCACCA
Downstream region at tRNA end position 
ttttccagac
Secondary structure (Cloverleaf model)
>ENV09003331	Val	CAC
                   c      ACCA ttttccagac
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T G T C C     A
        G A        A      | | | | |     A
      C     C T T G       A C A G G     C
      G     | | + |                 T T
      G     G A G C
        T A        A     GGGCC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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