The detailed information of tRNA gene sequence


Sequence ID>ENV09003339
Genome IDADGO01021463
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 505
End posion on genome 431
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cgccgaatga
tRNA gene sequence 
GGGGAATTAGCTCAGCTGGCTAGAGCGCTTGCATGGCATGCAAGAGGTCACCGGTTCGAC
TCCGGTATTCTCCACtt
Downstream region at tRNA end position 
gaaaattaat
Secondary structure (Cloverleaf model)
>ENV09003339	Ala	GGC
                   a      ACtt gaaaattaat
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T C
                    T     T G G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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