The detailed information of tRNA gene sequence


Sequence ID>ENV09003340
Genome IDADGO01021484
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 218
End posion on genome 294
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tgcagaagat
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGTGACGGTTTCCGAAGCCGTAGGTCACAGGTTCGAA
TCCTGTCGGGCGCGCCA
Downstream region at tRNA end position 
tcctccaann
Secondary structure (Cloverleaf model)
>ENV09003340	Arg	CCG
                   t      GCCA tcctccaann
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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