The detailed information of tRNA gene sequence


Sequence ID>ENV09003343
Genome IDADGO01022139
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 144
End posion on genome 220
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcgcgcgctt
tRNA gene sequence 
CGGGGTGTAGCACAGCCTGGTAGTGCGCTAGCTTTGGGAGCTAGATGTCGCTGGTTCGAA
TCCGGCCACCCCGACCA
Downstream region at tRNA end position 
gaaacgatga
Secondary structure (Cloverleaf model)
>ENV09003343	Pro	TGG
                   t      ACCA gaaacgatga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | | + | |     G
    C       C A C G       G C T G G     C
    T       | | | |                 T T
    G       G T G C
      G T A        G     ATGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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