The detailed information of tRNA gene sequence


Sequence ID>ENV09003349
Genome IDADGO01023270
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 522
End posion on genome 611
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtcccgccgc
tRNA gene sequence 
GGAAGGGTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCAGGGGCGCAAGCCTC
TCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
cagagcaggc
Secondary structure (Cloverleaf model)
>ENV09003349	Ser	TGA
                   c      GCCA cagagcaggc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CAGGGGCGCAAGCCTCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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