The detailed information of tRNA gene sequence


Sequence ID>ENV09003372
Genome IDADGO01026775
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 197
End posion on genome 106
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtcccgcaaa
tRNA gene sequence 
GGAAGGGTGGCTGAGTCCGGTTTAAGGCACACGACTCGAAATCGTGCGACGTGTAAAAGC
GTCCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
catcgccgga
Secondary structure (Cloverleaf model)
>ENV09003372	Ser	CGA
                   a      GCCA catcgccgga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G T C G       G T G G G     C
  G           + | |                 T T
  G         A G G C
    T T T A        A     CGACGTGTAAAAGCGTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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