The detailed information of tRNA gene sequence


Sequence ID>ENV09003396
Genome IDADGO01031137
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 452
End posion on genome 378
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttccctcaga
tRNA gene sequence 
GGGGATGTAGCTCAATCGGTTAGAGCACTGGACTGTCGATCCAGAGGTTGCGGGTTCGAG
TCCCGTCATCCTCGCtt
Downstream region at tRNA end position 
ttgcgagtag
Secondary structure (Cloverleaf model)
>ENV09003396	Asp	GTC
                   a      GCtt ttgcgagtag
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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