The detailed information of tRNA gene sequence


Sequence ID>ENV09003419
Genome IDADGO01036984
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 469
End posion on genome 394
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggccaaaaa
tRNA gene sequence 
GGCTAGGTAGCTCAGCGGTTAGAGCGTGGCACTCATAATGCCGAGGTCGTGAGTTCGAGT
CTCACCCTAGCCACCA
Downstream region at tRNA end position 
tcctctcgcg
Secondary structure (Cloverleaf model)
>ENV09003419	Met	CAT
                   a      ACCA tcctctcgcg
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     G - C
                     G - C          T G
                    T     C A C T C     A
      C G A        A      | | | | |     G
    G       C T C G       G T G A G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    T + G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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