The detailed information of tRNA gene sequence


Sequence ID>ENV09003425
Genome IDADGO01038975
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 180
End posion on genome 254
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
accccgtccg
tRNA gene sequence 
GGGCGATTAGCTCAGCGGGAGAGCGCTTCGTTCACACCGAAGAGGTCACTGGTTCGATCC
CAGTATCGCCCACCA
Downstream region at tRNA end position 
tcaataacca
Secondary structure (Cloverleaf model)
>ENV09003425	Val	CAC
                   g      ACCA tcaataacca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C T
                    T     T G A C C     A
        G A        A      | | | | |     G
      C     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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