The detailed information of tRNA gene sequence


Sequence ID>ENV09003436
Genome IDADGO01042676
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 384
End posion on genome 311
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gagagaacgt
tRNA gene sequence 
GTGTCCCTGGTGTAATGGCAGCACGACTGGCTCCAACCCAGTTGGTCAGGGTTCAAGTCC
TTGGGGACATGCCT
Downstream region at tRNA end position 
tatgcaagcc
Secondary structure (Cloverleaf model)
>ENV09003436	Trp	CCA
                   t      GCCT tatgcaagcc
                     G + T
                     T - A
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G          T G
                    T     G T T C C     A
        A A        G      | | + | |     A
      T     T G T G       C A G G G     C
      G     + | | |                 T T
      G     G C A C
        C A        G     TGGT
                    A - T
                    C - G
                    T - A
                    G - C
                    G - C
                  C       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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