The detailed information of tRNA gene sequence


Sequence ID>ENV09003452
Genome IDADGO01045834
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 164
End posion on genome 90
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caatcttctt
tRNA gene sequence 
GCGCCGCTCGTCTATCGGTCAGGACGCCGGGCTTTCAATCCGGAAAGAGGGGTTCAACTC
CCCTGCGGCGCCCCA
Downstream region at tRNA end position 
tcgggcacat
Secondary structure (Cloverleaf model)
>ENV09003452	Glu	TTC
                   t      CCCA tcgggcacat
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G          T C
                    T     T C C C C     A
      C T A        C      | | | | |     A
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      C A          G     AAAG
                    C - G
                    C - G
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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