The detailed information of tRNA gene sequence


Sequence ID>ENV09003453
Genome IDADGO01045873
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 279
End posion on genome 354
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gcccttcggt
tRNA gene sequence 
GGGCCCGTAGCTCAGCTGGGAGAGCGCCTCGTTCGCAATGAGGAGGTCAGGAGTTCGATC
CTCCTCGGGTCCACCA
Downstream region at tRNA end position 
acttccctct
Secondary structure (Cloverleaf model)
>ENV09003453	Ala	CGC
                   t      ACCA acttccctct
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          C T
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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