The detailed information of tRNA gene sequence


Sequence ID>ENV09003490
Genome IDADGO01065684
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 643
End posion on genome 567
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cctccttcaa
tRNA gene sequence 
GGAGCCGTAGCTCAATCGGTTAGAGCGCTGCCCTGTCACGGCAGAGGTTGCGGGTTCGAG
CCCCGTCGGCTCCGCCA
Downstream region at tRNA end position 
cttctctttc
Secondary structure (Cloverleaf model)
>ENV09003490	Asp	GTC
                   a      GCCA cttctctttc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C          C G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTT
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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