The detailed information of tRNA gene sequence


Sequence ID>ENV09003509
Genome IDADGO01072783
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 208
End posion on genome 113
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccgatctcac
tRNA gene sequence 
GGAGGAGGAACCCGGCCGGTGTCGGGCGCGGTCTTCAAAACCGACTGAGCCCCTTACGTG
GGGGCTGGATGGTTCGACTCCATCCCTCCTCCGCCA
Downstream region at tRNA end position 
tggcgcacgc
Secondary structure (Cloverleaf model)
>ENV09003509	SeC	TCA
                   c      GCCA tggcgcacgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    A     C T A C C     A
      C C G        A      | | | | |     G
    G       G C C C       G A T G G     C
    G       | | | |                 T T
    T       C G G G
      G T          C     CTGAGCCCCTTACGTGGGGGCTG
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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