The detailed information of tRNA gene sequence


Sequence ID>ENV09003514
Genome IDADGO01077667
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 154
End posion on genome 67
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccttgccggc
tRNA gene sequence 
GGTGGTGTGTCCGAGTGGCCTAAGGAGCACGCCTCGAAAGCGTGTGAGGGTTTGCGCCCT
CCGCGGGTTCGAATCCCGCCGCCACCGCtt
Downstream region at tRNA end position 
ctgacgaagc
Secondary structure (Cloverleaf model)
>ENV09003514	Ser	CGA
                   c      GCtt ctgacgaagc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G         | | |                 T T
    C       A G G A
      C T A        G     TGAGGGTTTGCGCCCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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