The detailed information of tRNA gene sequence


Sequence ID>ENV09003517
Genome IDADGO01078654
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 291
End posion on genome 198
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTATACGCCCCAAAAGG
CGTATCGGGGGTTCGAATCCCCCCGTCTCCGCCA
Downstream region at tRNA end position 
aacttcgctc
Secondary structure (Cloverleaf model)
>ENV09003517	Ser	GCT
                   n      GCCA aacttcgctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGCCCCAAAAGGCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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