The detailed information of tRNA gene sequence


Sequence ID>ENV09003518
Genome IDADGO01078769
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 5253
End posion on genome 5179
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ctttttcggg
tRNA gene sequence 
GCGCGCGTAGCTCAGCGGTAGAGCATCACCTTGACATGGTGGGGGTCACAGGTTCGATCC
CTGTCGCGCGCACCA
Downstream region at tRNA end position 
ccctttcttt
Secondary structure (Cloverleaf model)
>ENV09003518	Val	GAC
                   g      ACCA ccctttcttt
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     T G T C C     A
        G A        A      | | | | |     G
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T + G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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