The detailed information of tRNA gene sequence


Sequence ID>ENV09003571
Genome IDADGO01091268
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 353
End posion on genome 279
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accgccacac
tRNA gene sequence 
GGCGCCGTAGCTCAGTTGGTCAGAGCATCCGGCTCATAATCGGAAGGTCATCGGTTCGAT
CCCGATCGGCGCTACtc
Downstream region at tRNA end position 
acgtccccaa
Secondary structure (Cloverleaf model)
>ENV09003571	Met	CAT
                   c      ACtc acgtccccaa
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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