The detailed information of tRNA gene sequence


Sequence ID>ENV09003583
Genome IDADGO01095286
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 283
End posion on genome 199
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gctcgaagtg
tRNA gene sequence 
GGAGAGGTGCCCGAGAGGCCCAAGGGAGCGGTTTGCTAAACCGTGACGCCAAAAGCGTCC
GTGGGTTCGAATCCCACCCTCTCCGtat
Downstream region at tRNA end position 
ccaccggcgg
Secondary structure (Cloverleaf model)
>ENV09003583	Ser	GCT
                   g      Gtat ccaccggcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G T G G G     C
    G         | | |                 T T
    C       A G G G
      C C A        A     GACGCCAAAAGCGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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