The detailed information of tRNA gene sequence


Sequence ID>W2110109507
Genome IDCAJHCQ010000015
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesParaburkholderia hiiakae LMG 27952 [CAJHCQ]
Start position on genome 166167
End posion on genome 166262
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gttcgacgaa
tRNA gene sequence 
GGAAGGCATTCGTATCCGGTGGTACGGCCGGGCTTCAAACCCGGTTGGGGGCGTCAGCCG
CTCCCGGGTCAGTTCGACTCTGGCTGCCTTCCGCCA
Downstream region at tRNA end position 
gtttatttac
Secondary structure (Cloverleaf model)
>W2110109507	SeC	TCA
                   a      GCCA gtttatttac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    T     C G G T C     A
      C C T        T      | + | | |     G
    G       A T G C       G T C A G     C
    G       | | | |                 T T
    T       T A C G
      G G          G     TTGGGGGCGTCAGCCGCTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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