The detailed information of tRNA gene sequence


Sequence ID>ENV09003643
Genome IDADGO01117378
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 146
End posion on genome 62
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttttgatta
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTAACGGAGCAGATTGCTAATCTGTCGACGGGTAACCGTCGCC
AGGGTTCGAATCCCTGTCTCTCCGCtt
Downstream region at tRNA end position 
tcttttcggg
Secondary structure (Cloverleaf model)
>ENV09003643	Ser	GCT
                   a      GCtt tcttttcggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
        G A        G      | | | | |     G
      T     G G C C       C A G G G     C
      G       | | |                 T T
      G     A C G G
        T A        A     CGACGGGTAACCGTCGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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