The detailed information of tRNA gene sequence


Sequence ID>ENV09003674
Genome IDADGO01130715
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 179
End posion on genome 103
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctgacccggg
tRNA gene sequence 
GGCGGAGTAGCTCAGCTGGTTAGAGCAGAGGAATCATAATCCTTGTGTCGGCGGTTCGAA
TCCGTCCTCCGCTACCA
Downstream region at tRNA end position 
ttttgaagca
Secondary structure (Cloverleaf model)
>ENV09003674	Met	CAT
                   g      ACCA ttttgaagca
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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