The detailed information of tRNA gene sequence


Sequence ID>ENV09003697
Genome IDADGO01139838
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 99
End posion on genome 12
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgggcagtct
tRNA gene sequence 
GGAGGAGTGGCCGAGTGGTCTAAGGCAGCGGTTTTGAAAACCGCCGTGGGGCAACCCACC
AGGGGTTCGAATCCCTTCTCCTCCGCCA
Downstream region at tRNA end position 
cgtccgtatt
Secondary structure (Cloverleaf model)
>ENV09003697	Ser	TGA
                   t      GCCA cgtccgtatt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       A G G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        A     CGTGGGGCAACCCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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