The detailed information of tRNA gene sequence


Sequence ID>ENV09003715
Genome IDADGO01152279
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 322
End posion on genome 409
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctaggttgt
tRNA gene sequence 
GGAGAGGTCGCATAGTGGCTTAGTGCGCTCGCTTGGAAAGCGAGTACGGTGTAACAGCCG
TCGCGGGTTCGAATCCCGCCCTCTCCGCtg
Downstream region at tRNA end position 
tgcaaggcgg
Secondary structure (Cloverleaf model)
>ENV09003715	Ser	GGA
                   t      GCtg tgcaaggcgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    C       G T G C
      T T A        G     TACGGTGTAACAGCCGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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