The detailed information of tRNA gene sequence


Sequence ID>W2110119665
Genome IDCAJPFM010000234
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPlanctomycetaceae bacterium [CAJPFM]
Start position on genome 11581
End posion on genome 11492
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gccgatttcc
tRNA gene sequence 
GGAGGAGTGGCAGAGCGGCTGATTGCGTCGGTTTCGAAAACCGATTGTGCCTAACGGTAC
ACGGGGGTTCAAATCCCTCCTCCTCCGCCA
Downstream region at tRNA end position 
tcatggacac
Secondary structure (Cloverleaf model)
>W2110119665	Ser	CGA
                   c      GCCA tcatggacac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     A
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    C       T T G C
      T G A        G     TTGTGCCTAACGGTACAC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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