The detailed information of tRNA gene sequence


Sequence ID>ENV09003801
Genome IDADGO01180072
Search identical group
Phylum/ClassCompost metagenome contig00001
Species
Start position on genome 284
End posion on genome 199
Amino Acid Pseudo
Anticodon TGA
Upstream region at tRNA start position 
aaagaattaa
tRNA gene sequence 
AGAGAATTGACCGAGTGGTTTAAGGTGGTTAGTTTGAGTTTAACTATGGATTACCCCATC
ATAGGTTCGAATCCTATATTCTCTGCtg
Downstream region at tRNA end position 
catactatat
Secondary structure (Cloverleaf model)
>ENV09003801	Pseudo	TGA
                   a      GCtg catactatat
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     T A T C C     A
      T G A        G      | | | | |     G
    G       G C C A       A T A G G     C
    G         | | |                 T T
    T       A G G T
      T T A        G     TATGGATTACCCCATC
                    G - C
                    T - A
                    T - A
                    A - T
                    G + T
                  T       T
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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